Main Content

2. Funding Period

Project Area D

  • Inhalt ausklappen Inhalt einklappen D 1   Hannes LinkD 1   Hannes Link


    • Lempp M, Farke N, Kuntz M, Freibert SA, Lill R & Link H. 2019. Systematic identification of metabolites controlling gene expression in E. coli. Nature Communications 10, 4463

    • Díaz-Pascual F, Hartmann R, Lempp M, Vidakovic L, Song B, Jeckel H, Thormann KM, Yildiz FH, Dunkel J, Link H, Nadell CD & Drescher K. 2019. Breakdown of Vibrio cholerae biofilm architecture induced by antibiotics disrupts community barrier function. Nature Microbiology 1-10

    • Beuter D, Gomes-Filho J, Randau L, Díaz-Pascual F, Drescher K & Link H. 2018. Selective enrichment of slow-growing bacteria in a metabolism-wide CRISPRi library with a TIMER protein. ACS Synthetic Biology 7, 2775-2782

    • Han D, Link H, Liesack W. 2017. Response of Methylocystis sp. strain SC2 to salt Stress: physiology, global transcriptome, and amino acid profiles. Applied and Environmental Microbiology 83: e00866-17.

  • Inhalt ausklappen Inhalt einklappen  D 2   Tobias Erb D 2   Tobias Erb

    • Richter A. A., Kobus S., Czech L., Hoeppner A., Zarzycki J., Erb T.J., Lauterbach L., Dickschat J.S., Bremer E., Smits S.H.J. (2020) The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine. J Biol Chem. (in press)

    • Richter A. A., Mais C.-N., Czech L., Geyer K., Hoeppner A., Smits S. H. J., Erb T. J., Bange G., Bremer E. (2019) Biosynthesis of the stress-protectant and chemical chaperon ectoine: biochemistry of the transaminase EctB. Front. Microbiol. 10:2811.

    • Schada von Borzyskowski, L; Severi,F.; Krüger,K.; Hermann, L.; Gilardet; A.; Sippel, F.; Pommerenke, B.; Claus, P.; Socorro Cortina, N.; Glatter, T.; Zauner, S.; Zarzycki1,J.; Fuchs, B.M.; Bremer, E.; Maier; U.G.; Amann, R.I:; Erb, T.J. Marine Proteobacteria metabolise glycolate via the β-hydroxyaspartate cycle. Nature Vol. 575:500-504.

    • Seah BKB, Antony CP, Huettel B,  Zarzycki J, Schada von Borzyskowski L, Erb TJ , Kouris A, Kleiner M, Liebeke M, Dubilier N, Gruber-Vodicka HR. 2019.
      Sulfur-Oxidizing Symbionts without Canonical Genes for Autotrophic CO2 Fixation. mBio, in press

    • Kremer K, van Teeseling MCF, Schada von Borzyskowski L, Bernhardsgrütter I, van Spanning RJM, Gates AJ, Remus-Emsermann MNP, Thanbichler M, Erb TJ. 2019.
      Dynamic Metabolic Rewiring Enables Ef?cient Acetyl Coenzyme A Assimilation in Paracoccus denitri?cans. mBio, in press

    • Bernhardsgrütter I, Schell K, Peter DM, Borjian F, Saez DA, Vöhringer-Martinez E, Erb TJ. 2019
      Awakening the sleeping carboxylase function of enzymes: engi-neering the natural CO2-binding potential of reductases. J Am Chem Soc, in press

    • Bernhardsgrütter I, Vögeli B, Wagner T, Peter DM, Cortina NS, Bange G, Engilberge S, Girard E, Riobé F, Maury O, Shima S, Zarzycki J, Erb TJ. 2018.
      The multi-catalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite, Nature Chemical Biology, in press.

    • Schada von Borzyskowski L, Sonntag F, Pöschel L, Vorholt JA, Schrader J, Erb TJ, Buchhaupt M. 2018.
      Replacing the ethylmalonyl-CoA pathway with the glyoxylate shunt provides metabolic flexibility in the central carbon metabolism of Methylobacterium extorquens AM1. ACS Synthetic Biology 7:86-97.
  • Inhalt ausklappen Inhalt einklappen D 4   Uwe MaierD 4   Uwe Maier

    • Dell'Aquila G, Zauner S, Heimerl T, Kahnt J, Samel-Gondesen V, Runge S, Hempel F, Maier U. 2020. Mobilization and cellular distribution of phosphate in the diatom Phaeodactylum tricornutum. Frontiers in Plant Science. accepted

    • Schada von Borzyskowski, L; Severi,F.; Krüger,K.; Hermann, L.; Gilardet; A.; Sippel, F.; Pommerenke, B.; Claus, P.; Socorro Cortina, N.; Glatter, T.; Zauner, S.; Zarzycki1,J.; Fuchs, B.M.; Bremer, E.; Maier; U.G.; Amann, R.I:; Erb, T.J. 2019.
      Marine Proteobacteria metabolise glycolate via the β-hydroxyaspartate cycle. Nature Vol. 575, November 2019.
      DOI 10.1038/s41586-019-1748-4

    • Stukenberg D, Zauner S, Dell' Aquila G, Maier U.G. 2018.
      Optimizing CRISPR/Cas9 for the diatom Phaeodactylum tricornutum. Front. Plant Sci 10.3389/fpls.2018.00740
  • Inhalt ausklappen Inhalt einklappen D 5   Roland Lill & Ulrich MühlenhoffD 5   Roland Lill & Ulrich Mühlenhoff

    • Joseph J. Braymer, Martin Stumpfig, Stefanie Thelen, Ulrich Muhlenhoff, Roland Lill. 2019. Depletion of thiol reducing capacity impairs cytosolic but not mitochondrial iron-sulfur protein assembly machineries. Biochim Biophys Acta Mol Cell Res. 1866(2):240-251.

    • Lempp M, Farke N, Kuntz M, Freibert SA, Lill R & Link H. 2019. Systematic identification of metabolites controlling gene expression in E. coli. Nature Communications 10, 4463

    • Braymer, J.J., Stümpfig, M., Thelen, S., Mühlenhoff, U., & Lill, R. 2018.

      Depletion of thiol reducing capacity impairs cytosolic but not mitochondrial Fe/S protein assembly machineries. Biochim. Biophys. Acta 18xx, in press.

    • Uzarska, MA, Przybyla-Toscano J, Spantgar F, Zannini F, Lill R, Mühlenhoff U, Rouhier N. 2018.
      Conserved functions of Arabidopsis mitochondrial late-acting maturation factors in the trafficking of iron-sulfur clusters. Biochim. Biophys. Acta 1865, 1250-1259.

    • Braymer JJ, Lill R. 2017.
      Iron-sulfur cluster biogenesis and trafficking in mitochondria. J. Biol Chem 292:12754–12763.

    • Freibert SA, Goldberg AV, Hacker C, Molik S, Dean P, Williams TA, Nakjang S, Long S, Sendra K, Bill E, Heinz E, Hirt RP, Lucocq JM, Embley TM, Lill R. 2017.
      Evolutionary conservation and in vitro reconstitution of microsporidian iron-sulfur cluster biosynthesis. Nat Commun 8:13932.

    • Li H, Stümpfig M, Zhang C, An X, Stubbe J, Lill R, Huang M. 2017.
      The diferric-tyrosyl radical cluster of ribonucleotide reductase and cytosolic iron-sulfur clusters have distinct and similar biogenesis requirements. J Biol Chem 292:11445-11451.

    • Garcia-Santamarina S, Uzarska MA, Festa RA, Lill R, Thiele DJ. 2017.
      Cryptococcus neoformans iron-sulfur protein biogenesis machinery is a novel layer of protection against Cu stress. mBio 8:e01742-17.

    • Legati A, Reyes A, Ceccatelli Berti C, Stehling O, Marchet S, Lamperti C, Ferrari A, Robinson AJ, Mühlenhoff U, Lill R, Zeviani M, Goffrini P, Ghezzi D. 2017.
      A novel de novo dominant mutation in ISCU associated with mitochondrial myopathy. J Med Genet 54:815-824.

    • Christ S. Leichert LI, Willms A, Lill R, Mühlenhoff U. 2016.
      Defects in mitochondrial iron-sulfur cluster assembly induce cysteine S-polythiolation on iron-sulfur apoproteins. Antioxid Redox Signal 25: 28–40.

    • Melber A, Na U, Vashisht A, Weiler BD, Lill R, Wohlschlegel JA, Winge DR 2016.
      Role of Nfu1 and Bol3 in iron-sulfur cluster transfer to mitochondrial clients. Elife 5. e15991

    • Netz Daili JA, Genau HM, Weiler BD, Bill E, Pierik AJ, Lill R. 2016.
      The conserved protein Dre2 uses essential [2Fe-2S] and [4Fe-4S] clusters for its function in cytosolic iron-sulfur protein assembly. Biochem J 473: 2073–2085.

    • Uzarska MA, Nasta V, Weiler BD, Spantgar F, Ciofi-Baffoni S, Saviello MR, Gonnelli L, Mühlenhoff U, Banci L, Lill R. 2016.
      Mitochondrial Bol1 and Bol3 function as assembly factors for specific iron-sulfur proteins. eLife 5:e16673.
  • Inhalt ausklappen Inhalt einklappen D 6   Michael BölkerD 6   Michael Bölker

    • Stehlik T, Kremp M, Kahnt J, Bölker M and Freitag J (2020) Peroxisomal targeting of a protein phosphatase
      type 2C via mitochondrial transit. Nat Comm, in press, doi.org/10.1038/s41467-020-16146-3

    • Deinzer HT, Linne U, Xie X, Bölker M, Sandrock B. 2019
      Elucidation of substrate specificities of decorating enzymes involved in mannosylerythritol lipid production by cross-species complementation. Fungal Genet Biol. 130:91-97. doi: 10.1016/j.fgb.2019.05.003.

    • Herzog R, Solovyeva I, Bölker M, Lugones LG, Hennicke F. 2019
      Exploring molecular tools for transformation and gene expression in the cultivated edible mushroom Agrocybe aegerita. Mol Genet Genomics. 2294:663-677. doi: 10.1007/s00438-018-01528-6.

    • Aschenbroich J, Hussnaetter KP, Stoffels P, Langner T, Zander S, Sandrock B, Bölker M, Feldbrügge M, Schipper K. 2018
      The germinal centre kinase Don3 is crucial for unconventional secretion of chitinase Cts1 in Ustilago maydis. Biochim Biophys Acta Proteins Proteom. doi: 10.1016/j.bbapap.2018.10.007.

    • Brych A, Mascarenhas J, Jaeger E, Charkiewicz E, Pokorny R, Bölker M, Doehlemann G, Batschauer A. 2016
      White collar 1-induced photolyase expression contributes to UV-tolerance of Ustilago maydis. Microbiologyopen 5:224-243. doi: 10.1002/mbo3.322.

    • Geiser E, Przybilla SK, Friedrich A, Buckel W, Wierckx N, Blank LM, Bölker M. 2016.
      Ustilago maydis produces itaconic acid via the unusual intermediate trans-aconitate. Microb Biotechnol 9:116-26.
  • Inhalt ausklappen Inhalt einklappen D 7   Erhard BremerD 7   Erhard Bremer

    • Hermann, L., Mais C.-N., Czech L., Smits H.J., Bange G., Bremer E. (2020) The ups and downs of ectoine: structural enzymology of a major microbial stress protectant and versatile nutrient. Biol. Chem. (in press)
    • Mais C.-N., Hermann L., Altegoer F., Seubert A., Richter A. A., Wernersbach I., Czech L., Bremer E., Bange G. (2020) Degradation of the microbial stress protectants and chemical chaperones ectoine and hydroxyectoine by a bacterial hydrolase–deacetylase complex. J. Biol. Chem. 295:9087-9104.

    • Czech L., Hoeppner A., Smits H.J., Bremer E. (2020) Ectoine synthase: an iron-dependent member of the cupin superfamily. In: A. Messerschmidt (Ed) Encyclopedia of Inorganic and Bioinorganic Chemistry (e Edition) (in press)

    • Richter A. A., Kobus S., Czech L., Hoeppner A., Zarzycki J., Erb T.J., Lauterbach L., Dickschat J.S., Bremer E., Smits S.H.J. (2020) The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine. J Biol Chem. 259(9) 2822-2838.

    • Schada von Borzykowski L., ... , Bremer E., Maier U. G., Amann R. I., Erb T. J. (2019) Marine Proteobacteria metabolize glycolate via the ß-hydroxyaspartate cycle. Nature 575:500-504.

    • Richter A. A., Mais C.-N., Czech L., Geyer K., Hoeppner A., Smits S. H. J., Erb T. J., Bange G., Bremer E. (2019) Biosynthesis of the stress-protectant and chemical chaperon ectoine: biochemistry of the transaminase EctB. Front. Microbiol. 10:2811.

    • Czech L., Wilcken S., Czech O., Linne U., Brauner J., Smits S. H. J., Galinski E. A., Bremer E. (2019) Exploiting substrate promiscuity of ectoine hydroxylase for regio- and stereoselective modification of homoectoine. Front. Microbiol. 10:2745.

    • Czech L., Höppner A., Kobus S., Seubert A., Riclea R., Dickschat J. S., Heider J., Smits S. H. J., Bremer E. (2019) Illuminating the catalytic core of ectoine synthase through structural and biochemical analysis. Sci. Rep. Sci. Rep. 9:364.

    • Bremer E, Krämer R. 2019.
      Responses of microorganisms to osmotic stress. Annu. Rev. Microbiol. 73:313-34.

    • Czech L, Höppner A, Kobus S, Seubert A, Riclea R, Dickschat JS, Heider J, Smits SHJ, Bremer E. 2019
      Illuminating the catalytic core of ectoine synthase through structural and biochemical analysis. Sci. Rep. 9:364

    • Czech L, Hermann L, Stöveken N, Richter A, Hoeppner A, Smits SHJ, Heider J, Bremer E. 2018.
      Role of the extremolytes ectoine and hydroxyectoine as stress protectants and nutrients: genetics, phylogenomics, biochemistry, and structural analysis. Genes 9, 177

    • Czech L, Bremer E. 2018.
      With a pinch of extra salt - did predatory protists steal genes from their food? PLoS Biol 16:e2005163

    • Jose MJ, Hoffmann T, Sanchez-Porro C, Heider J, Ventosa A, Bremer E. 2018.
      Compatible solute synthesis and import by the moderate halophile Spiribacter salinus: physiology and genomics. Front Microbiol 9:108

    • Czech L, Poehl S, Hub P, Stoeveken N, Bremer E. 2018.
      Tinkering with osmotically controlled transcription allows enhanced production and excretion of ectoine and hydroxyectoine from a microbial cell factory. Appl Environ Microbiol 84:e01772-17

    • Schulz A, Hermann L, Freibert S, Bönig T, Hoffmann T, Riclea R, Dickschat J, Heider J, Bremer E. 2017.
      Transcriptional regulation of ectoine catabolism in response to multiple metabolic and environmental cues. Env Microbiol 19:4599-4619

    • Schulz A, Stöveken N, Binzen IM, Hoffmann T, Heider J, Bremer E. 2017
      Feeding on compatible solutes: a substrate-induced pathway for uptake and catabolism of ectoines and its genetic control by EnuR. Environ Microbiol 19: 926–946.

    • Czech L, Stöveken N, Bremer E. 2016
      EctD-mediated biotransformation of the chemical chaperone ectoine into hydroxyectoine and its mechanosensitive channel-independent excretion. Microb Cell Fact 15: 126.

    • Widderich N, Czech L, Elling FJ, Könneke M, Stöveken N, Pittelkow M, et al. 2016
      Strangers in the archaeal world: osmostress-responsive biosynthesis of ectoine and hydroxyectoine by the marine thaumarchaeon Nitrosopumilus maritimus. Environ Microbiol 18: 1227–1248.

    • Widderich N, Kobus S, Höppner A, Riclea R, Seubert A, Dickschat JS, et al. 2016
      Biochemistry and crystal structure of ectoine synthase: a metal-containing member of the cupin superfamily. PLoS ONE 11: e0151285.

    • Widderich N, Bremer E, Smits SHJ. 2016
      The Ectoine hydroxylase: a nonheme-containing iron(II) and 2-oxoglutarate-dependent dioxygenase. In: A. Messerschmidt (Ed) Encyclopedia of Inorganic and Bioinorganic Chemistry (e Edition)
  • Inhalt ausklappen Inhalt einklappen D 8   Werner LiesackD 8   Werner Liesack

    • Hakobyan A, Zhu J, Glatter T, Paczia N, Liesack W. 2020.
      Hydrogen utilization by Methylocystis sp. strain SC2 expands the known metabolic versatility of type IIa methanotrophs. Metab Engin 61, 181-196.

    • Abdallah RZ, Wegner C-E, Liesack W. 2019.
      Community transcriptomics reveals drainage effects on paddy soil microbiome across all three domains of life. Soil Biol. & Biochem. 132: 131-142.

    • Peng J, Wegner C-E, Bei Q, Liu P, Liesack W. 2018.
      Metatranscriptomics reveals a differential temperature effect on the structural and functional organization of the anaerobic food web in rice field soil. Microbiome 6: 169.

    • Han D, Dedysh SN, Liesack W. 2018.
      Unusual genomic traits suggest Methylocystis bryophila S285 to be well adapted for life in peatlands. Genome Biol. Evol. 10, 623-628.

    • Hakobyan A, Liesack W, Glatter T. 2018.
      Crude-MS strategy for in-depth proteome analysis of the methane-oxidizing Methylocystis sp. strain SC2. J. Proteome Res. 17, 3086-3103.

    • Peng J, Wegner C-E, Liesack W. 2017.
      Short-term exposure of paddy soil microbial communities to salt stress triggers different transcriptional responses of key taxonomic groups. Front Microbiol 8: 400.

    • Wegner C-E, Liesack W. 2017.
      Unexpected dominance of elusive Acidobacteria in early industrial soft coal slags. Front Microbiol 8: 1023.

    • Han D, Link H, Liesack W. 2017.
      Response of Methylocystis sp. strain SC2 to salt stress: Physiology, global transcriptome, and amino acid profiles. Appl Environ Microbiol 83:e00866-17. 
  • Inhalt ausklappen Inhalt einklappen D 9   Andreas BruneD 9   Andreas Brune

    • Feldewert C, Lang K, Brune A. 2020. The hydrogen threshold of obligately methyl-reducing methanogens. FEMS Microbiol Lett 367:fnaa137. https://doi.org/10.1093/femsle/fnaa137.

    • Michaud, C., Hervé, V., Dupont, S., Dubreuil, G., Bézier, A.M., Meunier, J., Brune, A., Dedeine, F. (2020) Efficient but occasionally imperfect vertical transmission of gut mutualistic protists in a wood-feeding termite. Mol. Ecol. 29: 308–324

    • Hervé, V., Liu, P., Dietrich, C., Sillam-Dussès, D., Stiblik, P., Šobotník, J., Brune, A. (2020) Phylogenomic analysis of 589 metagenome-assembled genomes encompassing all major prokaryotic lineages from the gut of higher termites. PeerJ 8: e8614

    • Lampert, N., Mikaelyan, A., Brune, A. (2019) Diet is not the primary driver of bacterial community structure in the gut of litter-feeding cockroaches. BMC Microbiol. 19: 238

    • Brune, A. (2019) Methanogenesis in the digestive tracts of insects and other arthropods. In: Biogenesis of Hydrocarbons (Book series: Handbook of Hydrocarbon and Lipid Microbiology) (Stams, A.J.M., Sousa, D., eds.). Springer, Cham, pp. 229–260.

    • Brune, A. (2018) Methanogens in the digestive tract of termites. In: (Endo)symbiotic Methanogenic Archaea, 2nd edn. Microbiology Monographs, vol. 19 (J.H.P. Hackstein, ed.). Springer, Cham, pp. 81–101.

    • Brune, A. (2018) Phylum Elusimicrobia. In: Bergey's Manual of Systematics of Archaea and Bacteria (W. B. Whitman, F. Rainey, P. Kämpfer, M. Trujillo, J. Chun, P. DeVos, B. Hedlund and S. Dedysh, eds.). Wiley Online Library. https://doi.org/10.1002/9781118960608.pbm00034

    • Brune, A. (2018) Genus Endomicrobium. In: Bergey's Manual of Systematics of Archaea and Bacteria (W. B. Whitman, F. Rainey, P. Kämpfer, M. Trujillo, J. Chun, P. DeVos, B. Hedlund and S. Dedysh, eds.). Wiley Online Library. https://doi.org/10.1002/9781118960608.gbm01492

    • Tokuda G, Mikaelyan A, Fukuia C, Matsuura Y, Watanabe H, Fujishima M, Brune A. 2018.
      Fiber-associated spirochetes are major agents of hemicellulose degradation in the hindgut of wood-feeding higher termites. Proc. Natl. Acad. Sci. USA 115: E11996–E12004.

    • Bourguignon T, Lo N, Dietrich C, Šobotník J, Sidek S, Roisin Y, Brune A, Evans TA. 2018.
      Rampant host-switching shaped the termite gut microbiome. Curr. Biol. 28: 649-654.e2.

    • Tegtmeier D, Belitz A, Radek R, Heimerl T, Brune A. 2018.
      Ereboglobus luteus gen. nov. sp. nov. from cockroach guts, and new insights into the oxygen relationship of the genera Opitutus and Didymococcus (Verrucomicrobia: Opitutaceae). Syst. Appl. Microbiol. 41: 101–112.

    • Mikaelyan A, Thompson CL, Meuser K, Zheng H, Rani P, Plarre R, Brune A. 2017.
      High-resolution phylogenetic analysis of Endomicrobia reveals multiple acquisitions of endosymbiotic lineages by termite gut flagellates. Environ. Microbiol. Rep. 9: 477–483.

    • Zheng H, Dietrich C, Brune A. 2017.
      Genome analysis of Endomicrobium proavitum suggests loss and gain of relevant functions during the evolution of intracellular symbionts. Appl. Environ. Microbiol. 83: e00656-17.

    • Mikaelyan A, Meuser K, Brune A. 2017.
      Microenvironmental heterogeneity of gut compartments drives bacterial community structure in wood- and humus-feeding higher termites. FEMS Microbiol Ecol 93: fiw20.

    • Hervé V, Brune A. 2017
      The complete mitochondrial genomes of the higher termites Labiotermes labralis and Embiratermes neotenicus (Termitidae: Syntermitinae). Mitochondr. DNA Part B 2: 109–110.

    • Li H, Dietrich C, Zhu N, Mikaelyan A, Ma B, Pi R, Liu Y, Yang M, Brune A, Mo J. 2016.
      Age polyethism drives community structure of the bacterial gut microbiota in the fungus-cultivating termite Odontotermes formosanus. Environ Microbiol 18:1440–1451.

Project Area E

  • Inhalt ausklappen Inhalt einklappen E 1   Alfred BatschauerE 1   Alfred Batschauer

    • Navarro E, Niemann N, Kock D., Dadaeva T, Gutiérrez G, Kiontke S, Corrochano LM, Batschauer A and Garre V. 2020. TThe DASH-type Cryptochrome from the Fungus Mucor circinelloides Is a Canonical CPD-Photolyase. Current Biol, doi: 10.1016/j.cub.2020.08.051.

    • Panzer S, Brych A, Batschauer A, Terpitz U. 2019.
      Opsin 1 and opsin 2 of the corn smut fungus Ustilago maydis are green light-driven proton pumps. Front. Microbiol., doi: 10.3389/fmicb.2019.00735

    • Orth C, Niemann N, Hennig L, Essen L-O, Batschauer A. 2017.
      Hyperactivity of the Arabidopsis cryptochrome 1 (cry1) L407F mutant is caused by a structural alteration close to the cry1 ATP-binding site. J. Biol. Chem. 4:292(31): 12906-12920
  • Inhalt ausklappen Inhalt einklappen E 2   Peter GraumannE 2   Peter Graumann

    • Lucena D, Mauri M, Schmidt F, Eckhardt B, Graumann PL. 2018.
      Microdomain formation is a general property of bacterial membrane proteins and induces heterogeneity of diffusion patterns. BMC Biol. 16(1):97. doi: 10.1186
  • Inhalt ausklappen Inhalt einklappen E 3   Hans-Ulrich MöschE 3   Hans-Ulrich Mösch

    • Brückner, S., Schubert R., Kraushaar T., Hartmann R., Hoffmann D., Jelli E., Drescher K., Müller DJ., Essen L.O., Mösch H.-U. (2020) Kin Discrimination in Social Yeast Is Mediated by Cell Surface Receptors of the Flo11 Adhesin Family. eLife 2020;9:e55587.
  • Inhalt ausklappen Inhalt einklappen E 4   Martin ThanbichlerE 4   Martin Thanbichler

    • Leicht O, van Teeseling MCF, Panis G, Reif C, Wendt H, Viollier PH, Thanbichler M (2020) Integrative and quantitative view of the CtrA regulatory network in a stalked budding bacterium. PLoS Genet (in press).

    • Hartmann R, van Teeseling MCF, Thanbichler M, Drescher K (2020) BacStalk: a comprehensive and interactive image analysis software tool for bacterial cell biology. Mol Microbiol (in press)

    • Kremer K, van Teeseling MCF, Schada von Borzyskowski L, Bernhardsgrütter I, van Spanning RJM, Gates AJ, Remus-Emsermann MNP, Thanbichler M, Erb T. 2019
      Dynamic metabolic rewiring enables efficient acetyl-CoA assimilation in Paracoccus denitrificans. MBio 10: e00805-19.

    • Billini M, Biboy J, Kühn J, Vollmer W, Thanbichler M. 2018. A specialized MreB-dependent cell wall biosynthetic complex mediates the formation of stalk-specific peptidoglycan in Caulobacter crescentus. PLoS Genet 15: e1007897
  • Inhalt ausklappen Inhalt einklappen E 5   Anke BeckerE 5   Anke Becker

    • López JL, Lozano MJ, Lagares A Jr, Fabre ML, Draghi WO, Del Papa MF, Pistorio M, Becker A, Wibberg D, Schlüter A, Pühler A, Blom J, Goesmann A, Lagares A. 2019
      Codon Usage heterogeneity in the multipartite prokaryote genome: selection-based coding bias associated with gene location, expression level, and ancestry. MBio 10: pii: e00505-19.

    • Schäper S, Wendt H, Bamberger J, Sieber V, Schmid J, Becker A. 2018
      A bifunctional UDP-sugar 4-epimerase supports biosynthesis of multiple cell surface polysaccharides in Sinorhizobium meliloti. J Bacteriol:201(10). pii: e00801-18. DOI: 10.1128/JB.00801-18.

    • Schäper S, Yau HCL, Krol E, Skotnicka D, Heimerl T, Gray J, Kaever V, Søgaard-Andersen L, Vollmer W, Becker A. 2018
      Seven-transmembrane receptor protein RgsP and cell wall-binding protein RgsM promote unipolar growth in Rhizobiales. PLoS Genet 14:e1007594.

    • Baumgardt K, Melior H, Madhugiri R, Thalmann S, Schikora A, McIntosh M, Becker A, Evguenieva-Hackenberg E. 2017.
      RNase E and RNase J are needed for S-adenosylmethionine homeostasis in Sinorhizobium meliloti. Microbiology SGM 2017: 570–583.

    • Medeot DB, Rivero MR, Cendoya E, Contreras-Moreira B, Rossi FA. Fischer SE, Becker A, Jofré E 2017.
      Sinorhizobium meliloti low molecular weight phosphotyrosine phosphatase SMc02309 modifies activity of the UDP-glucose pyrophosphorylase ExoN involved in succinoglycan biosynthesis. Microbiology SGM 2016: 552–563.

    • Salas MA, Lozano MJ, Lopez JL, Draghi W, Serrania J, Torres Tejerizo GA, Albicoro FJ, Nilsson JF, Pistorio M, del Papa MF, Parisi G, Becker A, Lagares A. 2017.
      Specificity traits consistent with legume-rhizobia coevolution displayed by Sinorhizobium meliloti rhizosphere colonization. Environ Microbiol. 19:3423-3438

    • Lagares A (Jr.), Borella GC, Linne U, Becker A, Valverde C 2017.
      Regulation of polyhydroxybutyrate accumulation in Sinorhizobium meliloti by the 1 trans-encoded small RNA MmgR. J Bacteriol. 199: e00776-16.

    • Robledo M, Peregrina A, Millán V, García-Tomsig NI, Torres-Quesada O, Mateos PF, et al. 2017.
      A conserved α-proteobacterial small RNA contributes to osmoadaptation and symbiotic efficiency of rhizobia on legume roots. Environ Microbiol. 19:2661-2680

    • Saramago M, Peregrina A, Robledo M, Matos RG, Hilker R, Serrania J, Becker A, Arraiano CM, Jiménez-Zurdo JI. 2017.
      Sinorhizobium meliloti YbeY is an endoribonuclease with unprecedented catalytic features, acting as silencing enzyme in riboregulation. Nucl Acids Res: 1371–1391.

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    • Breakdown of Vibrio cholerae biofilm architecture induced by antibiotics disrupts community barrier function. 2019
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    • Treuner Lange A., Chang Y.-W., Glatter T., Herfurth M., Lindow S., Chreifi G., Jensen G. J., Søgaard-Andersen, L. (2020) PilY1 and minor pilins form a complex priming the type IVa pilus in Myxococcus xanthus. Nat Commun 11, 5054
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      c-di-GMP regulates type IV pili-dependent-motility in Myxococcus xanthus. J Bacteriol 198:77-90.
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    • Brückner, S., Schubert R., Kraushaar T., Hartmann R., Hoffmann D., Jelli E., Drescher K., Müller DJ., Essen L.O., Mösch H.-U. (2020) Kin Discrimination in Social Yeast Is Mediated by Cell Surface Receptors of the Flo11 Adhesin Family. eLife 2020;9:e55587.

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